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  4. What determines eukaryotic translation elongation: recent molecular and quantitative analyses of protein synthesis
 
review article

What determines eukaryotic translation elongation: recent molecular and quantitative analyses of protein synthesis

Neelagandan, Nagammal  
•
Lamberti, Irene  
•
Carvalho, Hugo J. F.
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December 9, 2020
Open Biology

Protein synthesis from mRNA is an energy-intensive and tightly controlled cellular process. Translation elongation is a well-coordinated, multifactorial step in translation that undergoes dynamic regulation owing to cellular state and environmental determinants. Recent studies involving genome-wide approaches have uncovered some crucial aspects of translation elongation including the mRNA itself and the nascent polypeptide chain. Additionally, these studies have fuelled quantitative and mathematical modelling of translation elongation. In this review, we provide a comprehensive overview of the key determinants of translation elongation. We discuss consequences of ribosome stalling or collision, and how the cells regulate translation in case of such events. Next, we review theoretical approaches and widely used mathematical models that have become an essential ingredient to interpret complex molecular datasets and study translation dynamics quantitatively. Finally, we review recent advances in live-cell reporter and related analysis techniques, to monitor the translation dynamics of single cells and single-mRNA molecules in real time.

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Type
review article
DOI
10.1098/rsob.200292
Web of Science ID

WOS:000600142200002

Author(s)
Neelagandan, Nagammal  
Lamberti, Irene  
Carvalho, Hugo J. F.
Gobet, Cedric  
Naef, Felix  
Date Issued

2020-12-09

Publisher

ROYAL SOC

Published in
Open Biology
Volume

10

Issue

12

Article Number

200292

Subjects

Biochemistry & Molecular Biology

•

protein synthesis

•

translation elongation

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eif5a

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mathematical modelling

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tasep

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suntag imaging

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messenger-rna translation

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asymmetric exclusion model

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genome-wide analysis

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e3 ubiquitin ligase

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factor 5a eif5a

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quality-control

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codon usage

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polypeptide-synthesis

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promotes translation

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structural basis

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
UPNAE  
Available on Infoscience
January 5, 2021
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/174430
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