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research article

Mutant fate in spatially structured populations on graphs: Connecting models to experiments

Abbara, Alia  
•
Pagani, Lisa  
•
García-Pareja, Celia  
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September 1, 2024
PLoS Computational Biology

In nature, most microbial populations have complex spatial structures that can affect their evolution. Evolutionary graph theory predicts that some spatial structures modelled by placing individuals on the nodes of a graph affect the probability that a mutant will fix. Evolution experiments are beginning to explicitly address the impact of graph structures on mutant fixation. However, the assumptions of evolutionary graph theory differ from the conditions of modern evolution experiments, making the comparison between theory and experiment challenging. Here, we aim to bridge this gap by using our new model of spatially structured populations. This model considers connected subpopulations that lie on the nodes of a graph, and allows asymmetric migrations. It can handle large populations, and explicitly models serial passage events with migrations, thus closely mimicking experimental conditions. We analyze recent experiments in light of this model. We suggest useful parameter regimes for future experiments, and we make quantitative predictions for these experiments. In particular, we propose experiments to directly test our recent prediction that the star graph with asymmetric migrations suppresses natural selection and can accelerate mutant fixation or extinction, compared to a well-mixed population.

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Type
research article
DOI
10.1371/journal.pcbi.1012424
Scopus ID

2-s2.0-85203385512

PubMed ID

39241045

Author(s)
Abbara, Alia  

École Polytechnique Fédérale de Lausanne

Pagani, Lisa  

École Polytechnique Fédérale de Lausanne

García-Pareja, Celia  

École Polytechnique Fédérale de Lausanne

Bitbol, Anne Florence  

École Polytechnique Fédérale de Lausanne

Date Issued

2024-09-01

Published in
PLoS Computational Biology
Volume

20

Issue

9

Article Number

e1012424

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
UPBITBOL  
FunderFunding(s)Grant NumberGrant URL

European Research Council

Partha Chakraborty and Rees Kassen

European Union’s Horizon 2020 research and innovation programme

851173

Available on Infoscience
January 24, 2025
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/243802
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