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research article

Selecting control genes for RT-QPCR using public microarray data

Popovici, Vlad
•
Goldstein, Darlene R.
•
Antonov, Janine
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2009
Bmc Bioinformatics

Background: Gene expression analysis has emerged as a major biological research area, with real-time quantitative reverse transcription PCR (RT-QPCR) being one of the most accurate and widely used techniques for expression profiling of selected genes. In order to obtain results that are comparable across assays, a stable normalization strategy is required. In general, the normalization of PCR measurements between different samples uses one to several control genes (e. g. housekeeping genes), from which a baseline reference level is constructed. Thus, the choice of the control genes is of utmost importance, yet there is not a generally accepted standard technique for screening a large number of candidates and identifying the best ones.

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Type
research article
DOI
10.1186/1471-2105-10-42
Web of Science ID

WOS:000264007300001

Author(s)
Popovici, Vlad
Goldstein, Darlene R.
Antonov, Janine
Jaggi, Rolf
Delorenzi, Mauro
Wirapati, Pratyaksha
Date Issued

2009

Published in
Bmc Bioinformatics
Volume

10

Start page

42

Subjects

Breast-Cancer Patients

•

Normalization

•

Tamoxifen

•

Tumors

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
SB  
Available on Infoscience
November 30, 2010
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/60401
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