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  4. Wavelet-Based Detection of Stimulus Responses in Time-Lapse Microscopy
 
conference paper

Wavelet-Based Detection of Stimulus Responses in Time-Lapse Microscopy

Van De Ville, D.  
•
Bathellier, B.
•
Accolla, R.
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2006
Proceedings of the Thirty-First IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'06)

Many experimental paradigms in biology aim at studying the response to coordinated stimuli. In dynamic imaging experiments, the observed data is often not straightforward to interpret and not directly measurable in a quantitative fashion. Consequently, the data is typically preprocessed in an ad hoc fashion and the results subjected to a statistical inference at the level of a population. We propose a new framework for analyzing time-lapse images that exploits some a priori knowledge on the type of temporal response and takes advantage of the spatial correlation of the data. This is achieved by processing the data in the wavelet domain and expressing the time course of each wavelet coefficient by a linear model. We end up with a statistical map in the spatial domain for the contrast of interest (i.e., the stimulus response). The feasibility of the method is demonstrated by an example of intrinsic microscopy imaging of mice's brains during coordinated sensory stimulation.

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Type
conference paper
DOI
10.1109/ICASSP.2006.1661487
Author(s)
Van De Ville, D.  
Bathellier, B.
Accolla, R.
Carleton, A.
Blu, T.  
Unser, M.  
Date Issued

2006

Publisher

IEEE

Published in
Proceedings of the Thirty-First IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'06)
Issue

Toulouse, French Republic

Start page

V

End page

1161

URL

URL

http://bigwww.epfl.ch/publications/vandeville0602.html

URL

http://bigwww.epfl.ch/publications/vandeville0602.pdf

URL

http://bigwww.epfl.ch/publications/vandeville0602.ps
Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
LIB  
Available on Infoscience
September 18, 2015
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/118123
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