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research article

Contribution of recombination to the evolutionary history of HIV

Vuilleumier, Severine  
•
Bonhoeffer, Sebastian
2015
Current Opinion in HIV & AIDS

Purpose of review: An improved understanding of how recombination affects the evolutionary history of HIV is crucial to understand its current and future evolution. The present review aims to disentangle the manifold effects of recombination on HIV by discussing its effects on the evolutionary history and the adaptive potential of HIV in the context of concepts from evolutionary genetics and genomics. Recent findings: The increasing occurrence of secondary contacts between divergent subtype populations (during coinfection) results in increased observations of recombinants worldwide. Recombination is heterogeneous along the HIV genome. Consequences of recombination of HIV evolution are, in combination with other demographic processes, expected to either homogenize the genetic composition of HIV populations (homogenization) or provide the potential for novel adaptations (diversification). New methods in population genomics allow deep characterization of recombinant genome (the segment composition and origin) and their evolutionary trajectories. Summary: HIV recombinants increase worldwide and invade geographical regions where pure subtypes were previously predominant. This trend is expected to continue in the future, as ease to travel worldwide increases opportunities for recombination between divergent HIV strains. While the effects of recombination in HIV are much researched, more effort is required to characterize current HIV recombinant composition and dynamics. This can be achieved with new population genetic and genomic methods

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Type
research article
DOI
10.1097/COH.0000000000000137
Web of Science ID

WOS:000349353800003

Author(s)
Vuilleumier, Severine  
Bonhoeffer, Sebastian
Date Issued

2015

Published in
Current Opinion in HIV & AIDS
Volume

10

Issue

2

Start page

84

End page

89

Subjects

evolution

•

genome composition

•

population genetics

•

recombination

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
UPJENSEN  
Available on Infoscience
September 1, 2015
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/117510
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