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  4. Ser133 phosphate-KIX interactions in the CREB-CBP complex: an ab initio molecular dynamics study
 
research article

Ser133 phosphate-KIX interactions in the CREB-CBP complex: an ab initio molecular dynamics study

Dal Peraro, M.  
•
Alber, F.
•
Carloni, P.
2001
Eur Biophysical Journal

Cyclic AMP response element binding protein (CREB) is involved in activation of transcriptional DNA machinery by binding to the coactivator CREB-binding protein (CBP). The interactions between CREB serine phosphate (pSer133) and specific CBP residues (Tyr658 and Lys662) play a crucial role for the thermodynamic stability of the CREB-CBP complex. Here we use ab initio methods to investigate the dynamics and energetics of a relatively large, fully hydrated model complex representing pSer133 and its counterparts of the CBP domain. The calculations suggest that: (1) key contributions to the stabilization of the complex arise not only from electrostatics (as previously proposed) but also from a previously unrecognized "low-barrier hydrogen bond" between pSer133 and Lys662; (2) hydration plays a crucial role for the stabilization of the phosphate charge; (3) formation of the complex involves a significant degree of reorganization of the electronic charge density.

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Type
research article
DOI
10.1007/s002490000112
Author(s)
Dal Peraro, M.  
Alber, F.
Carloni, P.
Date Issued

2001

Published in
Eur Biophysical Journal
Volume

30

Issue

1

Start page

75

End page

81

Subjects

Binding Sites

•

CREB-Binding Protein

•

Cyclic AMP Response Element-Binding Protein/*chemistry/*metabolism

•

Electrostatics

•

Hydrogen Bonding

•

Kinetics

•

Lysine

•

Models

•

Molecular

•

Nuclear Magnetic Resonance

•

Biomolecular

•

Nuclear Proteins/*chemistry/*metabolism

•

Phosphoserine

•

Protein Conformation

•

Protein Structure

•

Secondary

•

Quantum Theory

•

Time Factors

•

Trans-Activators/*chemistry/*metabolism

•

Tyrosine

Editorial or Peer reviewed

REVIEWED

Written at

OTHER

EPFL units
UPDALPE  
Available on Infoscience
April 28, 2008
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/23502
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